Wed Dec 7 15:02:27 UTC 2011

author: Parabola <dev@list.parabolagnulinux.org> 2011-12-07 15:02:31 +0000
committer: Parabola <dev@list.parabolagnulinux.org> 2011-12-07 15:02:31 +0000
commit: 8736f458a17a03cf79a763a0c8122f93162fed71 (patch)
tree: fba97f22de8410ee5df8985e6c98756093578100 /staging
parent: d1d87d2ac643e3dabc251f3cec7d3b00e29b282c (diff)
30 files changed, 0 insertions, 1760 deletions
diff --git a/staging/akonadi/PKGBUILD b/staging/akonadi/PKGBUILD
deleted file mode 100644
index d282dba68..000000000
--- a/staging/akonadi/PKGBUILD
+++ /dev/null
@@ -1,32 +0,0 @@
-# $Id: PKGBUILD 143233 2011-11-23 19:28:19Z andrea $
-# Maintainer: Andrea Scarpino <andrea@archlinux.org>
-# Contributor: Pierre Schmitz <pierre@archlinux.de>
-
-pkgname=akonadi
-pkgver=1.6.2
-pkgrel=2
-pkgdesc="PIM layer, which provides an asynchronous API to access all kind of PIM data"
-arch=('i686' 'x86_64')
-url='http://pim.kde.org/akonadi'
-license=('LGPL')
-depends=('shared-mime-info' 'boost-libs' 'mysql' 'soprano')
-makedepends=('pkgconfig' 'cmake' 'automoc4' 'boost')
-install="${pkgname}.install"
-source=("http://download.kde.org/stable/${pkgname}/src/${pkgname}-${pkgver}.tar.bz2")
-md5sums=('07e2aa2e6953ac518f9306911747e264')
-
-build() {
-  cd "${srcdir}"
-  mkdir build
-  cd build
-  cmake ../${pkgname}-${pkgver} \
-    -DCMAKE_BUILD_TYPE=Release \
-    -DCMAKE_INSTALL_PREFIX=/usr \
-    -DINSTALL_QSQLITE_IN_QT_PREFIX=TRUE
-  make
-}
-
-package() {
-  cd "${srcdir}/build"
-  make DESTDIR="${pkgdir}" install
-}
diff --git a/staging/akonadi/akonadi.install b/staging/akonadi/akonadi.install
deleted file mode 100644
index 7c8a8bd2b..000000000
--- a/staging/akonadi/akonadi.install
+++ /dev/null
@@ -1,11 +0,0 @@
-post_install() {
-	update-mime-database usr/share/mime &> /dev/null
-}
-
-post_upgrade() {
-	post_install
-}
-
-post_remove() {
-	post_install
-}
diff --git a/staging/avogadro/PKGBUILD b/staging/avogadro/PKGBUILD
deleted file mode 100644
index 0b90bcbde..000000000
--- a/staging/avogadro/PKGBUILD
+++ /dev/null
@@ -1,42 +0,0 @@
-# $Id: PKGBUILD 143838 2011-11-29 20:05:21Z andrea $
-# Maintainer:
-# Contributor: Andrea Scarpino <andrea@archlinux.org>
-# Contributor: Nick B <Shirakawasuna at gmail _dot_com>
-
-pkgname=avogadro
-pkgver=1.0.3
-pkgrel=4
-pkgdesc="An advanced molecular editor based on Qt"
-arch=('i686' 'x86_64')
-url="http://avogadro.openmolecules.net/wiki/Main_Page"
-license=('GPL2')
-depends=('eigen2' 'openbabel' 'python2-pyqt' 'boost-libs' 'glew' 'python2-numpy')
-makedepends=('cmake' 'boost')
-install=avogadro.install
-source=("http://downloads.sourceforge.net/${pkgname}/${pkgname}-${pkgver}.tar.bz2"
-        'replace-qt4_automoc-with-qt4_wrap_cpp.patch'
-        'fix-boost.patch')
-md5sums=('92c2702c1980f70fb6d87a1a58147911'
-         'aec516daab066c15326a9681f8f15abc'
-         '46282e4709429447e44a0a54d51ad2ec')
-
-build() {
-  cd "${srcdir}"/${pkgname}-${pkgver}
-  patch -p1 -i "${srcdir}"/replace-qt4_automoc-with-qt4_wrap_cpp.patch
-  patch -p1 -i "${srcdir}"/fix-boost.patch
-
-  cd "${srcdir}"
-  mkdir build
-  cd build
-  cmake ../${pkgname}-${pkgver} \
-    -DCMAKE_BUILD_TYPE=Release \
-    -DCMAKE_INSTALL_PREFIX=/usr \
-    -DPYTHON_EXECUTABLE=/usr/bin/python2 \
-    -DQT_MKSPECS_RELATIVE=share/qt/mkspecs
-  make
-}
-
-package() {
-  cd "${srcdir}/build"
-  make DESTDIR="${pkgdir}" install
-}
diff --git a/staging/avogadro/avogadro.install b/staging/avogadro/avogadro.install
deleted file mode 100644
index 2eaa60550..000000000
--- a/staging/avogadro/avogadro.install
+++ /dev/null
@@ -1,11 +0,0 @@
-post_install() {
-  update-desktop-database -q
-}
-
-post_upgrade() {
-  post_install $1
-}
-
-post_remove() {
-  post_install $1
-}
diff --git a/staging/avogadro/fix-boost.patch b/staging/avogadro/fix-boost.patch
deleted file mode 100644
index 8fb53ef12..000000000
--- a/staging/avogadro/fix-boost.patch
+++ /dev/null
@@ -1,33 +0,0 @@
---- avogadro-1.0.3/libavogadro/src/CMakeLists.txt~	2011-11-29 18:33:01.777291627 +0000
-+++ avogadro-1.0.3/libavogadro/src/CMakeLists.txt	2011-11-29 18:33:23.480814612 +0000
-@@ -149,7 +149,7 @@
-   endforeach(P_ITEM ${PYTHON_SRCS})
- endif(NOT ENABLE_PYTHON OR NOT ALL_PYTHON_FOUND)
- 
--QT4_WRAP_CPP(libavogadro_MOC_SRCS ${libavogadro_MOC_HDRS})
-+QT4_WRAP_CPP(libavogadro_MOC_SRCS ${libavogadro_MOC_HDRS} OPTIONS -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED)
- 
- # you have to add link_directories before you add the target
- if(ENABLE_PYTHON AND ALL_PYTHON_FOUND)
---- avogadro-1.0.3/libavogadro/src/python/CMakeLists.txt~	2011-11-29 18:37:15.449506548 +0000
-+++ avogadro-1.0.3/libavogadro/src/python/CMakeLists.txt	2011-11-29 18:37:52.729831744 +0000
-@@ -11,7 +11,7 @@
- # use all cpp files in this directory
- FILE(GLOB wrapper_SRCS "*.cpp")
- 
--QT4_WRAP_CPP(MOC_SRCS moleculelist.h)
-+QT4_WRAP_CPP(MOC_SRCS moleculelist.h OPTIONS -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED)
- 
- ADD_LIBRARY(python-module MODULE ${wrapper_SRCS} ${MOC_SRCS})
- SET_TARGET_PROPERTIES(python-module PROPERTIES OUTPUT_NAME Avogadro)
---- avogadro-1.0.3/libavogadro/CMakeLists.txt~	2011-11-29 19:41:34.066938217 +0000
-+++ avogadro-1.0.3/libavogadro/CMakeLists.txt	2011-11-29 19:42:53.084320315 +0000
-@@ -18,7 +18,7 @@
-   # Assume all MOC stuff is in the headers, replace .cpp and use qt4_wrap_cpp
-   # We should probably scan the header to verify the Q_OBJECT macro is used
-   string(REPLACE ".cpp" ".h" hdr_list "${src_list}")
--  qt4_wrap_cpp(moc_files ${hdr_list})
-+  qt4_wrap_cpp(moc_files ${hdr_list} OPTIONS -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED)
-   # Now sort out the ui and qrc files, process them as appropriate
-   set(ui_plugin_files)
-   set(qrc_plugin_files)
diff --git a/staging/avogadro/replace-qt4_automoc-with-qt4_wrap_cpp.patch b/staging/avogadro/replace-qt4_automoc-with-qt4_wrap_cpp.patch
deleted file mode 100644
index 11f58a505..000000000
--- a/staging/avogadro/replace-qt4_automoc-with-qt4_wrap_cpp.patch
+++ /dev/null
@@ -1,778 +0,0 @@
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/CMakeLists.txt avogadro-1.0.3-edit/libavogadro/src/CMakeLists.txt
---- avogadro-1.0.3/libavogadro/src/CMakeLists.txt	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/CMakeLists.txt	2011-11-29 18:49:58.520790652 +0100
-@@ -75,6 +75,42 @@
-   zmatrix.h
- )
- 
-+SET(libavogadro_MOC_HDRS
-+  animation.h
-+  atom.h
-+  bond.h
-+  color.h
-+  colorbutton.h
-+  colors/elementcolor.h
-+  cube.h
-+  elementdetail_p.h
-+  elementtranslator.h
-+  engine.h
-+  engines/bsdyengine.h
-+  extension.h
-+  fragment.h
-+  glwidget.h
-+  mesh.h
-+  molecule.h
-+  moleculefile.h
-+  moleculefile_p.h
-+  periodictablescene_p.h
-+  periodictableview.h
-+  plotwidget.h
-+  plugin.h
-+  pluginmanager.h
-+  primitive.h
-+  protein.h
-+  pythonengine_p.h
-+  pythonerror.h
-+  pythonextension_p.h
-+  pythontool_p.h
-+  residue.h
-+  tool.h
-+  toolgroup.h
-+  zmatrix.h
-+)
-+
- set(libavogadro_SRCS ${libavogadro_SRCS} ${libavogadro_UIS})
- # Also add in the qtiocompressor class
- #set(libavogadro_SRCS ${libavogadro_SRCS} ../qtiocompressor/qtiocompressor.cpp)
-@@ -113,7 +148,7 @@
-   endforeach(P_ITEM ${PYTHON_SRCS})
- endif(NOT ENABLE_PYTHON OR NOT ALL_PYTHON_FOUND)
- 
--qt4_automoc(${libavogadro_SRCS})
-+QT4_WRAP_CPP(libavogadro_MOC_SRCS ${libavogadro_MOC_HDRS})
- 
- # you have to add link_directories before you add the target
- if(ENABLE_PYTHON AND ALL_PYTHON_FOUND)
-@@ -149,7 +184,7 @@
-     COMMAND ${CMAKE_COMMAND} -E ${header_cmd} "${from}" "${to}")
- endforeach(headerFile ${libavogadro_HDRS})
- 
--add_library(avogadro SHARED ${libavogadro_SRCS} ${libavogadro_QM} ${pythontool_RC_SRCS})
-+add_library(avogadro SHARED ${libavogadro_SRCS} ${libavogadro_MOC_SRCS} ${libavogadro_QM} ${pythontool_RC_SRCS})
- set_target_properties(avogadro
-   PROPERTIES VERSION ${Avogadro_VERSION_FULL} SOVERSION 1 )
- target_link_libraries(avogadro ${AVO_LINK_LIBRARIES})
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/animation.cpp avogadro-1.0.3-edit/libavogadro/src/animation.cpp
---- avogadro-1.0.3/libavogadro/src/animation.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/animation.cpp	2011-11-29 18:48:47.967839537 +0100
-@@ -224,5 +224,3 @@
-   }
- 
- } // end namespace Avogadro
--
--#include "animation.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/atom.cpp avogadro-1.0.3-edit/libavogadro/src/atom.cpp
---- avogadro-1.0.3/libavogadro/src/atom.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/atom.cpp	2011-11-29 18:48:39.561218412 +0100
-@@ -293,5 +293,3 @@
-    }
- 
-  } // End namespace Avogadro
--
--#include "atom.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/bond.cpp avogadro-1.0.3-edit/libavogadro/src/bond.cpp
---- avogadro-1.0.3/libavogadro/src/bond.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/bond.cpp	2011-11-29 18:49:00.067773985 +0100
-@@ -166,5 +166,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "bond.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/color.cpp avogadro-1.0.3-edit/libavogadro/src/color.cpp
---- avogadro-1.0.3/libavogadro/src/color.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/color.cpp	2011-11-29 18:49:05.207746140 +0100
-@@ -152,5 +152,3 @@
-     return "Generic Color";
-   }
- }
--
--#include "color.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/colorbutton.cpp avogadro-1.0.3-edit/libavogadro/src/colorbutton.cpp
---- avogadro-1.0.3/libavogadro/src/colorbutton.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/colorbutton.cpp	2011-11-29 18:49:11.987709410 +0100
-@@ -94,5 +94,3 @@
-   }
- 
- } // end namespace
--
--#include "colorbutton.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/colors/elementcolor.cpp avogadro-1.0.3-edit/libavogadro/src/colors/elementcolor.cpp
---- avogadro-1.0.3/libavogadro/src/colors/elementcolor.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/colors/elementcolor.cpp	2011-11-29 18:50:11.077389292 +0100
-@@ -63,7 +63,5 @@
- 
- }
- 
--#include "elementcolor.moc"
- //this is a static color plugin...
- //Q_EXPORT_PLUGIN2(elementcolor, Avogadro::ElementColorFactory)
--
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/cube.cpp avogadro-1.0.3-edit/libavogadro/src/cube.cpp
---- avogadro-1.0.3/libavogadro/src/cube.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/cube.cpp	2011-11-29 18:50:26.357306516 +0100
-@@ -322,5 +322,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "cube.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/elementdetail_p.cpp avogadro-1.0.3-edit/libavogadro/src/elementdetail_p.cpp
---- avogadro-1.0.3/libavogadro/src/elementdetail_p.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/elementdetail_p.cpp	2011-11-29 18:50:37.680578505 +0100
-@@ -132,5 +132,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "elementdetail_p.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/elementtranslator.cpp avogadro-1.0.3-edit/libavogadro/src/elementtranslator.cpp
---- avogadro-1.0.3/libavogadro/src/elementtranslator.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/elementtranslator.cpp	2011-11-29 18:50:48.160521729 +0100
-@@ -401,5 +401,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "elementtranslator.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/engine.cpp avogadro-1.0.3-edit/libavogadro/src/engine.cpp
---- avogadro-1.0.3/libavogadro/src/engine.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/engine.cpp	2011-11-29 18:50:54.397154610 +0100
-@@ -377,5 +377,3 @@
-       return m_molecule->bonds();
-   }
- }
--
--#include "engine.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/engines/bsdyengine.cpp avogadro-1.0.3-edit/libavogadro/src/engines/bsdyengine.cpp
---- avogadro-1.0.3/libavogadro/src/engines/bsdyengine.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/engines/bsdyengine.cpp	2011-11-29 18:51:18.733689435 +0100
-@@ -442,7 +442,5 @@
-   }
- 
- }
--
--#include "bsdyengine.moc"
- // This is a static engine...
- // Q_EXPORT_PLUGIN2( bsdyengine, Avogadro::BSDYEngineFactory )
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/extension.cpp avogadro-1.0.3-edit/libavogadro/src/extension.cpp
---- avogadro-1.0.3/libavogadro/src/extension.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/extension.cpp	2011-11-29 18:51:56.360152261 +0100
-@@ -80,5 +80,3 @@
-   }
- 
- }
--
--#include "extension.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/fragment.cpp avogadro-1.0.3-edit/libavogadro/src/fragment.cpp
---- avogadro-1.0.3/libavogadro/src/fragment.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/fragment.cpp	2011-11-29 18:52:01.906788880 +0100
-@@ -82,5 +82,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "fragment.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/glwidget.cpp avogadro-1.0.3-edit/libavogadro/src/glwidget.cpp
---- avogadro-1.0.3/libavogadro/src/glwidget.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/glwidget.cpp	2011-11-29 18:52:14.346721486 +0100
-@@ -1966,5 +1966,3 @@
-     d->updateCache = true;
-   }
- }
--
--#include "glwidget.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/mesh.cpp avogadro-1.0.3-edit/libavogadro/src/mesh.cpp
---- avogadro-1.0.3/libavogadro/src/mesh.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/mesh.cpp	2011-11-29 18:52:23.033341093 +0100
-@@ -231,5 +231,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "mesh.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/molecule.cpp avogadro-1.0.3-edit/libavogadro/src/molecule.cpp
---- avogadro-1.0.3/libavogadro/src/molecule.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/molecule.cpp	2011-11-29 18:52:33.573283993 +0100
-@@ -1575,5 +1575,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "molecule.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/moleculefile.cpp avogadro-1.0.3-edit/libavogadro/src/moleculefile.cpp
---- avogadro-1.0.3/libavogadro/src/moleculefile.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/moleculefile.cpp	2011-11-29 18:56:26.728687548 +0100
-@@ -22,23 +22,14 @@
-   02110-1301, USA.
-  **********************************************************************/
- 
--#include "moleculefile.h"
-+#include "moleculefile_p.h"
- 
- #include <avogadro/molecule.h>
- 
--#include <QFile>
- #include <QFileInfo>
--#include <QStringList>
--#include <QThread>
- #include <QDebug>
- #include <QPointer>
- 
--#include <openbabel/mol.h>
--#include <openbabel/obconversion.h>
--
--// Included in obconversion.h
--//#include <iostream>
--
- namespace Avogadro {
- 
-   using OpenBabel::OBConversion;
-@@ -578,164 +569,6 @@
-     return false;
-   }
- 
--  class ReadFileThread : public QThread
--  {
--    //    Q_OBJECT 
--
--    public:
--      ReadFileThread(MoleculeFile *moleculeFile) : m_moleculeFile(moleculeFile)
--      {
--      }
--      
--      void addConformer(const OpenBabel::OBMol &conformer)
--      {
--        unsigned int numAtoms = conformer.NumAtoms();
--        std::vector<Eigen::Vector3d> *coords = new std::vector<Eigen::Vector3d>(numAtoms);
--        for (unsigned int i = 0; i < numAtoms; ++i)
--          coords->push_back(Eigen::Vector3d(conformer.GetAtom(i+1)->GetVector().AsArray()));
--        m_moleculeFile->m_conformers.push_back(coords);
--      }
--
--      void detectConformers(unsigned int c, const OpenBabel::OBMol &first, const OpenBabel::OBMol &current)
--      {
--        if (!c) {
--          // this is the first molecule read
--          m_moleculeFile->setConformerFile(true);
--          addConformer(current);
--          return;
--        }
--
--        if (!m_moleculeFile->isConformerFile())
--          return;
--
--        // as long as we are not sure if this really is a 
--        // conformer/trajectory file, add the conformers
--        addConformer(current);
--
--        // performance: check only certain molecule 1-10,20,50
--        switch (c) {
--          case 1:
--          case 2:
--          case 3:
--          case 4:
--          case 5:
--          case 6:
--          case 7:
--          case 8:
--          case 9:
--          case 10:
--          case 20:
--          case 50:
--            break;
--          default:
--            return;
--        }
--
--        if (first.NumAtoms() != current.NumAtoms()) {
--          m_moleculeFile->setConformerFile(false);
--          m_moleculeFile->m_conformers.clear();
--          return;
--        }
--
--        for (unsigned int i = 0; i < first.NumAtoms(); ++i) {
--          OpenBabel::OBAtom *firstAtom = first.GetAtom(i+1);
--          OpenBabel::OBAtom *currentAtom = current.GetAtom(i+1);
--          if (firstAtom->GetAtomicNum() != currentAtom->GetAtomicNum()) {
--            m_moleculeFile->setConformerFile(false);
--            m_moleculeFile->m_conformers.clear();
--            return;
--          }    
--        }
--      }
--
--      void run()
--      {
--        // Check that the file can be read from disk
--        if (!MoleculeFile::canOpen(m_moleculeFile->m_fileName, QFile::ReadOnly | QFile::Text)) {
--          // Cannot read the file
--          m_moleculeFile->m_error.append(QObject::tr("File %1 cannot be opened for reading.")
--                                         .arg(m_moleculeFile->m_fileName));
--          return;
--        }
-- 
--        // Construct the OpenBabel objects, set the file type
--        OpenBabel::OBConversion conv;
--        OpenBabel::OBFormat *inFormat;
--        if (!m_moleculeFile->m_fileType.isEmpty() && !conv.SetInFormat(m_moleculeFile->m_fileType.toAscii().data())) {
--          // Input format not supported
--          m_moleculeFile->m_error.append(
--              QObject::tr("File type '%1' is not supported for reading.").arg(m_moleculeFile->m_fileType));
--          return;
--        } else {
--          inFormat = conv.FormatFromExt(m_moleculeFile->m_fileName.toAscii().data());
--          if (!inFormat || !conv.SetInFormat(inFormat)) {
--            // Input format not supported
--            m_moleculeFile->m_error.append(QObject::tr("File type for file '%1' is not supported for reading.")
--                                           .arg(m_moleculeFile->m_fileName));
--            return;
--          }
--        }
--
--        // set any options
--        if (!m_moleculeFile->m_fileOptions.isEmpty()) {
--          foreach(const QString &option,
--              m_moleculeFile->m_fileOptions.split('\n', QString::SkipEmptyParts)) {
--            conv.AddOption(option.toAscii().data(), OBConversion::INOPTIONS);
--          }
--        }
--
--        // Now attempt to read the molecule in
--        ifstream ifs;
--        ifs.open(m_moleculeFile->m_fileName.toLocal8Bit()); // This handles utf8 file names etc
--        if (!ifs) // Should not happen, already checked file could be opened
--          return;
--      
--        // read all molecules
--        OpenBabel::OBMol firstOBMol, currentOBMol;
--        unsigned int c = 0;
--        conv.SetInStream(&ifs);
--        m_moleculeFile->streamposRef().push_back(ifs.tellg());
--        while (ifs.good() && conv.Read(&currentOBMol)) {
--          if (!c)
--            firstOBMol = currentOBMol;
--
--          if (c > 20 && !m_moleculeFile->isConformerFile())
--            m_moleculeFile->setFirstReady(true);
--
--          // detect conformer/trajectory files
--          detectConformers(c, firstOBMol, currentOBMol);
--          // store information about molecule
--          m_moleculeFile->streamposRef().push_back(ifs.tellg());
--          m_moleculeFile->titlesRef().append(currentOBMol.GetTitle());
--          // increment count
--          ++c;
--        }
--        m_moleculeFile->streamposRef().pop_back();
--
--        // signle molecule files are not conformer files
--        if (c == 1) {
--          m_moleculeFile->setConformerFile(false);
--          m_moleculeFile->m_conformers.clear();
--        }
--
--        // check for empty titles
--        for (int i = 0; i < m_moleculeFile->titlesRef().size(); ++i) {
--          if (!m_moleculeFile->titlesRef()[i].isEmpty())
--            continue;
--
--          QString title;
--          if (m_moleculeFile->isConformerFile())
--            title = tr("Conformer %1").arg(i+1);
--          else
--            title = tr("Molecule %1").arg(i+1);
--        
--          m_moleculeFile->titlesRef()[i] = title;
--        }
--      }
--
--      MoleculeFile *m_moleculeFile;
--  }; // end ReadFileThread class
--
-   MoleculeFile* MoleculeFile::readFile(const QString &fileName,
-       const QString &fileType, const QString &fileOptions, bool wait)
-   {
-@@ -794,6 +627,3 @@
-   }
- 
- } // end namespace Avogadro
--
--#include "moleculefile.moc"
--
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/moleculefile_p.h avogadro-1.0.3-edit/libavogadro/src/moleculefile_p.h
---- avogadro-1.0.3/libavogadro/src/moleculefile_p.h	1970-01-01 01:00:00.000000000 +0100
-+++ avogadro-1.0.3-edit/libavogadro/src/moleculefile_p.h	2011-11-29 18:57:43.108273764 +0100
-@@ -0,0 +1,202 @@
-+/**********************************************************************
-+  MoleculeFile - Class representing molecule file.
-+
-+  Copyright (C) 2009 Marcus Hanwell, Tim Vandermeersch
-+
-+  This file is part of the Avogadro molecular editor project.
-+  For more information, see <http://avogadro.openmolecules.net/>
-+
-+  Avogadro is free software; you can redistribute it and/or modify
-+  it under the terms of the GNU General Public License as published by
-+  the Free Software Foundation; either version 2 of the License, or
-+  (at your option) any later version.
-+
-+  Avogadro is distributed in the hope that it will be useful,
-+  but WITHOUT ANY WARRANTY; without even the implied warranty of
-+  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-+  GNU General Public License for more details.
-+
-+  You should have received a copy of the GNU General Public License
-+  along with this program; if not, write to the Free Software
-+  Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
-+  02110-1301, USA.
-+ **********************************************************************/
-+
-+#ifndef MOLECULEFILE_P_H
-+#define MOLECULEFILE_P_H
-+
-+#include "moleculefile.h"
-+
-+#include <openbabel/mol.h>
-+#include <openbabel/obconversion.h>
-+
-+#include <QFile>
-+#include <QStringList>
-+#include <QThread>
-+
-+namespace Avogadro {
-+
-+  using OpenBabel::OBConversion;
-+  using std::ifstream;
-+
-+class ReadFileThread : public QThread
-+{
-+      Q_OBJECT
-+
-+  public:
-+    ReadFileThread(MoleculeFile *moleculeFile) : m_moleculeFile(moleculeFile)
-+    {
-+    }
-+
-+    void addConformer(const OpenBabel::OBMol &conformer)
-+    {
-+      unsigned int numAtoms = conformer.NumAtoms();
-+      std::vector<Eigen::Vector3d> *coords = new std::vector<Eigen::Vector3d>(numAtoms);
-+      for (unsigned int i = 0; i < numAtoms; ++i)
-+        coords->push_back(Eigen::Vector3d(conformer.GetAtom(i+1)->GetVector().AsArray()));
-+      m_moleculeFile->m_conformers.push_back(coords);
-+    }
-+
-+    void detectConformers(unsigned int c, const OpenBabel::OBMol &first, const OpenBabel::OBMol &current)
-+    {
-+      if (!c) {
-+        // this is the first molecule read
-+        m_moleculeFile->setConformerFile(true);
-+        addConformer(current);
-+        return;
-+      }
-+
-+      if (!m_moleculeFile->isConformerFile())
-+        return;
-+
-+      // as long as we are not sure if this really is a
-+      // conformer/trajectory file, add the conformers
-+      addConformer(current);
-+
-+      // performance: check only certain molecule 1-10,20,50
-+      switch (c) {
-+        case 1:
-+        case 2:
-+        case 3:
-+        case 4:
-+        case 5:
-+        case 6:
-+        case 7:
-+        case 8:
-+        case 9:
-+        case 10:
-+        case 20:
-+        case 50:
-+          break;
-+        default:
-+          return;
-+      }
-+
-+      if (first.NumAtoms() != current.NumAtoms()) {
-+        m_moleculeFile->setConformerFile(false);
-+        m_moleculeFile->m_conformers.clear();
-+        return;
-+      }
-+
-+      for (unsigned int i = 0; i < first.NumAtoms(); ++i) {
-+        OpenBabel::OBAtom *firstAtom = first.GetAtom(i+1);
-+        OpenBabel::OBAtom *currentAtom = current.GetAtom(i+1);
-+        if (firstAtom->GetAtomicNum() != currentAtom->GetAtomicNum()) {
-+          m_moleculeFile->setConformerFile(false);
-+          m_moleculeFile->m_conformers.clear();
-+          return;
-+        }
-+      }
-+    }
-+
-+    void run()
-+    {
-+      // Check that the file can be read from disk
-+      if (!MoleculeFile::canOpen(m_moleculeFile->m_fileName, QFile::ReadOnly | QFile::Text)) {
-+        // Cannot read the file
-+        m_moleculeFile->m_error.append(QObject::tr("File %1 cannot be opened for reading.")
-+                                       .arg(m_moleculeFile->m_fileName));
-+        return;
-+      }
-+
-+      // Construct the OpenBabel objects, set the file type
-+      OpenBabel::OBConversion conv;
-+      OpenBabel::OBFormat *inFormat;
-+      if (!m_moleculeFile->m_fileType.isEmpty() && !conv.SetInFormat(m_moleculeFile->m_fileType.toAscii().data())) {
-+        // Input format not supported
-+        m_moleculeFile->m_error.append(
-+            QObject::tr("File type '%1' is not supported for reading.").arg(m_moleculeFile->m_fileType));
-+        return;
-+      } else {
-+        inFormat = conv.FormatFromExt(m_moleculeFile->m_fileName.toAscii().data());
-+        if (!inFormat || !conv.SetInFormat(inFormat)) {
-+          // Input format not supported
-+          m_moleculeFile->m_error.append(QObject::tr("File type for file '%1' is not supported for reading.")
-+                                         .arg(m_moleculeFile->m_fileName));
-+          return;
-+        }
-+      }
-+
-+      // set any options
-+      if (!m_moleculeFile->m_fileOptions.isEmpty()) {
-+        foreach(const QString &option,
-+            m_moleculeFile->m_fileOptions.split('\n', QString::SkipEmptyParts)) {
-+          conv.AddOption(option.toAscii().data(), OBConversion::INOPTIONS);
-+        }
-+      }
-+
-+      // Now attempt to read the molecule in
-+      ifstream ifs;
-+      ifs.open(m_moleculeFile->m_fileName.toLocal8Bit()); // This handles utf8 file names etc
-+      if (!ifs) // Should not happen, already checked file could be opened
-+        return;
-+
-+      // read all molecules
-+      OpenBabel::OBMol firstOBMol, currentOBMol;
-+      unsigned int c = 0;
-+      conv.SetInStream(&ifs);
-+      m_moleculeFile->streamposRef().push_back(ifs.tellg());
-+      while (ifs.good() && conv.Read(&currentOBMol)) {
-+        if (!c)
-+          firstOBMol = currentOBMol;
-+
-+        if (c > 20 && !m_moleculeFile->isConformerFile())
-+          m_moleculeFile->setFirstReady(true);
-+
-+        // detect conformer/trajectory files
-+        detectConformers(c, firstOBMol, currentOBMol);
-+        // store information about molecule
-+        m_moleculeFile->streamposRef().push_back(ifs.tellg());
-+        m_moleculeFile->titlesRef().append(currentOBMol.GetTitle());
-+        // increment count
-+        ++c;
-+      }
-+      m_moleculeFile->streamposRef().pop_back();
-+
-+      // signle molecule files are not conformer files
-+      if (c == 1) {
-+        m_moleculeFile->setConformerFile(false);
-+        m_moleculeFile->m_conformers.clear();
-+      }
-+
-+      // check for empty titles
-+      for (int i = 0; i < m_moleculeFile->titlesRef().size(); ++i) {
-+        if (!m_moleculeFile->titlesRef()[i].isEmpty())
-+          continue;
-+
-+        QString title;
-+        if (m_moleculeFile->isConformerFile())
-+          title = tr("Conformer %1").arg(i+1);
-+        else
-+          title = tr("Molecule %1").arg(i+1);
-+
-+        m_moleculeFile->titlesRef()[i] = title;
-+      }
-+    }
-+
-+    MoleculeFile *m_moleculeFile;
-+};
-+
-+} // end namespace Avogadro
-+
-+#endif // MOLECULEFILE_P_H
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/periodictablescene_p.cpp avogadro-1.0.3-edit/libavogadro/src/periodictablescene_p.cpp
---- avogadro-1.0.3/libavogadro/src/periodictablescene_p.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/periodictablescene_p.cpp	2011-11-29 18:52:50.259860261 +0100
-@@ -213,5 +213,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "periodictablescene_p.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/periodictableview.cpp avogadro-1.0.3-edit/libavogadro/src/periodictableview.cpp
---- avogadro-1.0.3/libavogadro/src/periodictableview.cpp     2011-11-29 19:30:25.130970122 +0000
-+++ avogadro-1.0.3-edit/libavogadro/src/periodictableview.cpp        2011-11-29 18:52:50.259860261 +0100
-@@ -69,4 +69,3 @@
- 
- } // End namespace Avogadro
- 
--#include "periodictableview.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/plotwidget.cpp avogadro-1.0.3-edit/libavogadro/src/plotwidget.cpp
---- avogadro-1.0.3/libavogadro/src/plotwidget.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/plotwidget.cpp	2011-11-29 18:53:09.389756626 +0100
-@@ -27,7 +27,6 @@
-  **********************************************************************/
- 
- #include "plotwidget.h"
--#include "plotwidget.moc"
- 
- #include <math.h>
- #include <QDebug>
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/plugin.cpp avogadro-1.0.3-edit/libavogadro/src/plugin.cpp
---- avogadro-1.0.3/libavogadro/src/plugin.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/plugin.cpp	2011-11-29 18:53:16.016387394 +0100
-@@ -65,5 +65,3 @@
-   }
- 
- } // end namespace Avogadro
--
--#include "plugin.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/pluginmanager.cpp avogadro-1.0.3-edit/libavogadro/src/pluginmanager.cpp
---- avogadro-1.0.3/libavogadro/src/pluginmanager.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/pluginmanager.cpp	2011-11-29 18:53:23.569679807 +0100
-@@ -784,5 +784,3 @@
-   }
- 
- }
--
--#include "pluginmanager.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/primitive.cpp avogadro-1.0.3-edit/libavogadro/src/primitive.cpp
---- avogadro-1.0.3/libavogadro/src/primitive.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/primitive.cpp	2011-11-29 18:53:29.139649631 +0100
-@@ -77,5 +77,3 @@
-   }
- 
- }
--
--#include "primitive.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/protein.cpp avogadro-1.0.3-edit/libavogadro/src/protein.cpp
---- avogadro-1.0.3/libavogadro/src/protein.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/protein.cpp	2011-11-29 18:53:37.952935219 +0100
-@@ -978,5 +978,3 @@
-   }
- 
- } // End namespace Avogadro
--
--#include "protein.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/python/CMakeLists.txt avogadro-1.0.3-edit/libavogadro/src/python/CMakeLists.txt
---- avogadro-1.0.3/libavogadro/src/python/CMakeLists.txt	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/python/CMakeLists.txt	2011-11-29 18:58:02.354836165 +0100
-@@ -11,9 +11,9 @@
- # use all cpp files in this directory
- FILE(GLOB wrapper_SRCS "*.cpp")
- 
--qt4_automoc(moleculelist.cpp)
-+QT4_WRAP_CPP(MOC_SRCS moleculelist.h)
- 
--ADD_LIBRARY(python-module MODULE ${wrapper_SRCS})
-+ADD_LIBRARY(python-module MODULE ${wrapper_SRCS} ${MOC_SRCS})
- SET_TARGET_PROPERTIES(python-module PROPERTIES OUTPUT_NAME Avogadro)
- SET_TARGET_PROPERTIES(python-module PROPERTIES PREFIX "")
- if (WIN32)
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/python/moleculelist.cpp avogadro-1.0.3-edit/libavogadro/src/python/moleculelist.cpp
---- avogadro-1.0.3/libavogadro/src/python/moleculelist.cpp     2011-11-29 19:26:07.562214311 +0100
-+++ avogadro-1.0.3-edit/libavogadro/src/python/moleculelist.cpp      2011-11-29 19:26:14.538843182 +0100
-@@ -70,4 +70,3 @@
- 
- }
- 
--#include "moleculelist.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/pythonengine_p.cpp avogadro-1.0.3-edit/libavogadro/src/pythonengine_p.cpp
---- avogadro-1.0.3/libavogadro/src/pythonengine_p.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/pythonengine_p.cpp	2011-11-29 18:53:45.492894371 +0100
-@@ -289,5 +289,3 @@
- 
- 
- }
--
--#include "pythonengine_p.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/pythonerror.cpp avogadro-1.0.3-edit/libavogadro/src/pythonerror.cpp
---- avogadro-1.0.3/libavogadro/src/pythonerror.cpp     2011-11-29 19:24:26.949426045 +0100
-+++ avogadro-1.0.3-edit/libavogadro/src/pythonerror.cpp      2011-11-29 19:24:41.176015640 +0100
-@@ -112,4 +112,3 @@
- 
- } // namespace
- 
--#include "pythonerror.moc"
-
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/pythonextension_p.cpp avogadro-1.0.3-edit/libavogadro/src/pythonextension_p.cpp
---- avogadro-1.0.3/libavogadro/src/pythonextension_p.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/pythonextension_p.cpp	2011-11-29 18:53:54.082847836 +0100
-@@ -340,5 +340,3 @@
-   }
- 
- }
--
--#include "pythonextension_p.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/pythontool_p.cpp avogadro-1.0.3-edit/libavogadro/src/pythontool_p.cpp
---- avogadro-1.0.3/libavogadro/src/pythontool_p.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/pythontool_p.cpp	2011-11-29 18:54:02.269470152 +0100
-@@ -344,5 +344,3 @@
-   }
- 
- }
--
--#include "pythontool_p.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/residue.cpp avogadro-1.0.3-edit/libavogadro/src/residue.cpp
---- avogadro-1.0.3/libavogadro/src/residue.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/residue.cpp	2011-11-29 18:54:14.316071557 +0100
-@@ -160,6 +160,3 @@
-   }
- 
- } // End namespace Avogadro
--
-- #include "residue.moc"
--
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/tool.cpp avogadro-1.0.3-edit/libavogadro/src/tool.cpp
---- avogadro-1.0.3/libavogadro/src/tool.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/tool.cpp	2011-11-29 18:55:05.515794184 +0100
-@@ -117,5 +117,3 @@
-   }
- 
- } // end namespace Avogadro
--
--#include "tool.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/toolgroup.cpp avogadro-1.0.3-edit/libavogadro/src/toolgroup.cpp
---- avogadro-1.0.3/libavogadro/src/toolgroup.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/toolgroup.cpp	2011-11-29 18:55:11.699094018 +0100
-@@ -206,5 +206,3 @@
-   }
- 
- } // end namespace Avogadro
--
--#include "toolgroup.moc"
-diff -U 3 -H -d -r -N -- avogadro-1.0.3/libavogadro/src/zmatrix.cpp avogadro-1.0.3-edit/libavogadro/src/zmatrix.cpp
---- avogadro-1.0.3/libavogadro/src/zmatrix.cpp	2011-04-25 07:22:18.000000000 +0200
-+++ avogadro-1.0.3-edit/libavogadro/src/zmatrix.cpp	2011-11-29 18:55:17.209064168 +0100
-@@ -149,5 +149,3 @@
- 
- 
- } // End namespace Avogadro
--
--#include "zmatrix.moc"
diff --git a/staging/boost/BOOST_FOREACH.patch b/staging/boost/BOOST_FOREACH.patch
deleted file mode 100644
index 12cf08800..000000000
--- a/staging/boost/BOOST_FOREACH.patch
+++ /dev/null
@@ -1,60 +0,0 @@
-Index: /trunk/boost/foreach_fwd.hpp
-===================================================================
---- /trunk/boost/foreach_fwd.hpp	(revision 62661)
-+++ /trunk/boost/foreach_fwd.hpp	(revision 75540)
-@@ -15,4 +15,6 @@
- #define BOOST_FOREACH_FWD_HPP
- 
-+#include <utility> // for std::pair
-+
- // This must be at global scope, hence the uglified name
- enum boost_foreach_argument_dependent_lookup_hack
-@@ -26,4 +28,7 @@
- namespace foreach
- {
-+    template<typename T>
-+    std::pair<T, T> in_range(T begin, T end);
-+
-     ///////////////////////////////////////////////////////////////////////////////
-     // boost::foreach::tag
-@@ -47,4 +52,22 @@
- } // namespace foreach
- 
-+// Workaround for unfortunate https://svn.boost.org/trac/boost/ticket/6131
-+namespace BOOST_FOREACH
-+{
-+    using foreach::in_range;
-+    using foreach::tag;
-+
-+    template<typename T>
-+    struct is_lightweight_proxy
-+      : foreach::is_lightweight_proxy<T>
-+    {};
-+
-+    template<typename T>
-+    struct is_noncopyable
-+      : foreach::is_noncopyable<T>
-+    {};
-+
-+} // namespace BOOST_FOREACH
-+
- } // namespace boost
- 
-Index: /trunk/boost/foreach.hpp
-===================================================================
---- /trunk/boost/foreach.hpp	(revision 75077)
-+++ /trunk/boost/foreach.hpp	(revision 75540)
-@@ -166,5 +166,5 @@
- //   at the global namespace for your type.
- template<typename T>
--inline boost::foreach::is_lightweight_proxy<T> *
-+inline boost::BOOST_FOREACH::is_lightweight_proxy<T> *
- boost_foreach_is_lightweight_proxy(T *&, BOOST_FOREACH_TAG_DEFAULT) { return 0; }
- 
-@@ -191,5 +191,5 @@
- //   at the global namespace for your type.
- template<typename T>
--inline boost::foreach::is_noncopyable<T> *
-+inline boost::BOOST_FOREACH::is_noncopyable<T> *
- boost_foreach_is_noncopyable(T *&, BOOST_FOREACH_TAG_DEFAULT) { return 0; }
- 
diff --git a/staging/boost/PKGBUILD b/staging/boost/PKGBUILD
deleted file mode 100644
index 8d5114db2..000000000
--- a/staging/boost/PKGBUILD
+++ /dev/null
@@ -1,121 +0,0 @@
-# $Id: PKGBUILD 143606 2011-11-27 10:46:32Z ibiru $
-# Maintainer: kevin <kevin@archlinux.org>
-# Contributor: Giovanni Scafora <giovanni@archlinux.org>
-# Contributor: Kritoke <kritoke@gamebox.net>
-# Contributor: Luca Roccia <little_rock@users.sourceforge.net>
-
-pkgbase=boost
-pkgname=('boost-libs' 'boost')
-pkgver=1.48.0
-_boostver=${pkgver//./_}
-pkgrel=2
-arch=('i686' 'x86_64')
-url="http://www.boost.org/"
-makedepends=('icu' 'python' 'python2' 'bzip2' 'zlib' 'openmpi')
-source=(http://downloads.sourceforge.net/${pkgbase}/${pkgbase}_${_boostver}.tar.gz
-        exceptions.patch
-        BOOST_FOREACH.patch)
-license=('custom')
-md5sums=('313a11e97eb56eb7efd18325354631be'
-         '9b44c28b36303152050c8c82469569c5'
-         '2db6098a1a39bced4c6162eb46418320')
-
-_stagedir="${srcdir}/stagedir"
-
-build() {
-  # set python path for bjam
-  cd "${srcdir}/${pkgbase}_${_boostver}/tools"
-  echo "using python : 2.7 : /usr/bin/python2 ;" >> build/v2/user-config.jam
-  echo "using python : 3.2 : /usr/bin/python : /usr/include/python3.2mu : /usr/lib ;" >> build/v2/user-config.jam
-  echo "using mpi ;" >> build/v2/user-config.jam
-
-  cd "${srcdir}"/${pkgbase}_${_boostver}
-  # https://svn.boost.org/trac/boost/ticket/5731
-  patch -p0 -i "${srcdir}/exceptions.patch"
-  # https://svn.boost.org/trac/boost/ticket/6131
-  patch -p2 -i "${srcdir}/BOOST_FOREACH.patch"
-
-
-  # build bjam
-  cd "${srcdir}/${pkgbase}_${_boostver}/tools/build/v2/engine"
-  ./build.sh cc
-
-  _bindir="bin.linuxx86"
-  [ "${CARCH}" = "x86_64" ] && _bindir="bin.linuxx86_64"
-
-  install -d "${_stagedir}"/usr/bin
-  install ${_bindir}/bjam "${_stagedir}"/usr/bin/bjam
-
-  # build tools
-  cd "${srcdir}/${pkgbase}_${_boostver}/tools/"
-  "${_stagedir}"/usr/bin/bjam --toolset=gcc
-
-  # copy the tools
-  cd "${srcdir}/${pkgbase}_${_boostver}/dist/bin"
-  for i in *;do
-      install -m755 "${i}" "${_stagedir}/usr/bin/${i}"
-  done
-
-  #boostbook needed by quickbook
-  cd "${srcdir}/${pkgbase}_${_boostver}/dist/"
-  cp -r share "${_stagedir}"
-
-  # build libs
-  cd "${srcdir}/${pkgbase}_${_boostver}"
-
-  # default "minimal" install: "release link=shared,static
-  # runtime-link=shared threading=single,multi"
-  # --layout=tagged will add the "-mt" suffix for multithreaded libraries
-  # and installs includes in /usr/include/boost.
-  # --layout=system no longer adds the -mt suffix for multi-threaded libs.
-  # install to ${_stagedir} in preparation for split packaging
-
-  "${_stagedir}"/usr/bin/bjam \
-      release debug-symbols=off threading=multi \
-      runtime-link=shared link=shared,static \
-      cflags=-fno-strict-aliasing \
-      toolset=gcc \
-      --prefix="${_stagedir}" \
-      -sTOOLS=gcc \
-      --layout=system \
-      ${MAKEFLAGS} \
-      install
-}
-
-package_boost() {
-    pkgdesc="Free peer-reviewed portable C++ source libraries - Development"
-    depends=("boost-libs=${pkgver}")
-    optdepends=('python: for python bindings'
-                'python2: for python2 bindings')
-
-    install -d "${pkgdir}"/usr/{include,lib,share}
-    # headers/source files
-    cp -r "${_stagedir}"/include/ "${pkgdir}"/usr/
-
-    # static libs
-    cp -r "${_stagedir}"/lib/*.a "${pkgdir}"/usr/lib/
-
-    # utilities (bjam, bcp, pyste)
-    cp -r "${_stagedir}"/usr/* "${pkgdir}"/usr/
-
-    #boostbook
-    cp -r "${_stagedir}"/share/* "${pkgdir}"/usr/share
-
-    # license
-    install -D -m644 "${srcdir}/${pkgbase}_${_boostver}/LICENSE_1_0.txt" \
-        "${pkgdir}"/usr/share/licenses/boost/LICENSE_1_0.txt
-}
-
-package_boost-libs() {
-    pkgdesc="Free peer-reviewed portable C++ source libraries - Runtime"
-    depends=('gcc-libs' 'bzip2' 'zlib' 'icu')
-    optdepends=('openmpi: for mpi support')
-
-    install -d "${pkgdir}/usr/lib"
-    #shared libs
-    cp -r "${_stagedir}"/lib/*.so{,.*} "${pkgdir}/usr/lib/"
-
-    # license
-    install -D -m644 "${srcdir}/${pkgbase}_${_boostver}/LICENSE_1_0.txt" \
-        "${pkgdir}"/usr/share/licenses/boost-libs/LICENSE_1_0.txt
-}
diff --git a/staging/boost/exceptions.patch b/staging/boost/exceptions.patch
deleted file mode 100644
index 9faa71526..000000000
--- a/staging/boost/exceptions.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-diff -up boost/numeric/conversion/converter_policies.hpp\~ boost/numeric/conversion/converter_policies.hpp
---- boost/numeric/conversion/converter_policies.hpp~	2008-10-13 11:00:03.000000000 +0200
-+++ boost/numeric/conversion/converter_policies.hpp	2011-07-22 11:46:40.961876274 +0200
-@@ -20,6 +20,7 @@
- 
- #include "boost/mpl/if.hpp"
- #include "boost/mpl/integral_c.hpp"
-+#include "boost/throw_exception.hpp"
- 
- namespace boost { namespace numeric
- {
-@@ -159,9 +160,9 @@ struct def_overflow_handler
-   void operator() ( range_check_result r ) // throw(negative_overflow,positive_overflow)
-   {
-     if ( r == cNegOverflow )
--      throw negative_overflow() ;
-+      boost::throw_exception( negative_overflow() ) ;
-     else if ( r == cPosOverflow )
--           throw positive_overflow() ;
-+      boost::throw_exception( positive_overflow() ) ;
-   }
- } ;
- 
-
-Diff finished.  Fri Jul 22 11:46:49 2011
diff --git a/staging/ekiga/PKGBUILD b/staging/ekiga/PKGBUILD
deleted file mode 100644
index fb7fe42d9..000000000
--- a/staging/ekiga/PKGBUILD
+++ /dev/null
@@ -1,36 +0,0 @@
-# $Id: PKGBUILD 143593 2011-11-26 22:32:57Z ibiru $
-# Maintainer: Jan de Groot <jgc@archlinux.org>
-# Contributor: Tom K <tomk@runbox.com>
-
-pkgname=ekiga
-pkgver=3.3.2
-pkgrel=2
-pkgdesc="VOIP/Videoconferencing app with full SIP and H.323 support (GnomeMeeting expanded and renamed)"
-url="http://www.ekiga.org"
-license=(GPL)
-arch=(i686 x86_64)
-depends=('opal' 'boost-libs' 'libxv' 'libnotify' 'hicolor-icon-theme' 'avahi' 'gtk2' 'gconf')
-makedepends=('intltool' 'gnome-doc-utils' 'evolution-data-server' 'boost' 'gnome-common')
-optdepends=('evolution-data-server: Evolution integration')
-options=(!emptydirs)
-groups=('gnome-extra')
-install=ekiga.install
-source=(http://ftp.gnome.org/pub/gnome/sources/${pkgname}/${pkgver%.*}/${pkgname}-${pkgver}.tar.xz)
-sha256sums=('d4dd47a47696c53e6f3839eef6e0e896dd3d07babb2e68ff8fe994d67ba8807a')
-
-build() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-  ./configure --prefix=/usr --sysconfdir=/etc \
-      --localstatedir=/var --disable-schemas-install \
-      --disable-scrollkeeper --enable-dbus
-  make
-}
-
-package() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-  make DESTDIR="${pkgdir}" GCONF_DISABLE_MAKEFILE_SCHEMA_INSTALL=1 install
-
-  install -m755 -d "${pkgdir}/usr/share/gconf/schemas"
-  gconf-merge-schema "${pkgdir}/usr/share/gconf/schemas/${pkgname}.schemas" --domain ekiga ${pkgdir}/etc/gconf/schemas/*.schemas
-  rm -f ${pkgdir}/etc/gconf/schemas/*.schemas
-}
diff --git a/staging/ekiga/ekiga.install b/staging/ekiga/ekiga.install
deleted file mode 100644
index b1d76a4a3..000000000
--- a/staging/ekiga/ekiga.install
+++ /dev/null
@@ -1,22 +0,0 @@
-pkgname=ekiga
-
-post_install() {
-  usr/sbin/gconfpkg --install ${pkgname}
-  gtk-update-icon-cache -q -t -f usr/share/icons/hicolor
-}
-
-pre_upgrade() {
-  pre_remove $1
-}
-
-post_upgrade() {
-  post_install $1
-}
-
-pre_remove() {
-  usr/sbin/gconfpkg --uninstall ${pkgname}
-}
-
-post_remove() {
-  gtk-update-icon-cache -q -t -f usr/share/icons/hicolor
-}
diff --git a/staging/hugin/PKGBUILD b/staging/hugin/PKGBUILD
deleted file mode 100644
index af979e2b7..000000000
--- a/staging/hugin/PKGBUILD
+++ /dev/null
@@ -1,34 +0,0 @@
-# $Id: PKGBUILD 143262 2011-11-24 07:45:07Z eric $
-# Maintainer: Tobias Kieslich <tobias@archlinux.org>
-# Contributor: Giovanni Scafora <giovanni@archlinux.org>
-# Contributor: Dominik Ryba <domryba@post.pl>
-
-pkgname=hugin
-pkgver=2011.2.0
-pkgrel=2
-pkgdesc="A frontend to the panorama-tools"
-arch=('i686' 'x86_64')
-url="http://hugin.sourceforge.net/"
-license=('GPL')
-depends=('wxgtk' 'boost-libs' 'enblend-enfuse' 'exiv2' 'autopano-sift-c'
-         'lapack' 'desktop-file-utils' 'make' 'perl-exiftool')
-makedepends=('zip' 'cmake' 'boost' 'tclap')
-install=hugin.install
-source=(http://downloads.sourceforge.net/${pkgname}/${pkgname}-${pkgver}.tar.bz2)
-sha1sums=('79dfdac229b4e58f50c893c1238bdd0921ad9da6')
-
-build() {
-  cd "${srcdir}"
-  mkdir build && cd build
-  cmake "${srcdir}/${pkgname}-${pkgver}" \
-    -DCMAKE_BUILD_TYPE=Release \
-    -DCMAKE_INSTALL_PREFIX=/usr \
-    -DCMAKE_EXE_LINKER_FLAGS="-lpthread" \
-    -DENABLE_LAPACK=yes
-  make
-}
-
-package(){
-  cd "${srcdir}/build"
-  make DESTDIR="${pkgdir}" install
-}
diff --git a/staging/hugin/hugin.install b/staging/hugin/hugin.install
deleted file mode 100644
index 362749233..000000000
--- a/staging/hugin/hugin.install
+++ /dev/null
@@ -1,15 +0,0 @@
-post_install() {
-  gtk-update-icon-cache -q -t -f usr/share/icons/gnome
-  update-desktop-database -q
-  update-mime-database usr/share/mime > /dev/null
-}
-
-post_upgrade() {
-  post_install $1
-}
-
-post_remove() {
-  gtk-update-icon-cache -q -t -f usr/share/icons/gnome
-  update-desktop-database -q
-  update-mime-database usr/share/mime > /dev/null
-}
diff --git a/staging/liborigin2/PKGBUILD b/staging/liborigin2/PKGBUILD
deleted file mode 100644
index f6aa8cb0c..000000000
--- a/staging/liborigin2/PKGBUILD
+++ /dev/null
@@ -1,57 +0,0 @@
-# $Id: PKGBUILD 143503 2011-11-25 08:32:03Z andrea $
-# Maintainer: Ronald van Haren <ronald.archlinux.org>
-# Contributor: damir <damir@archlinux.org>
-
-pkgbase=liborigin2
-pkgname=('liborigin2' 'liborigin2-docs')
-pkgver=20100913
-pkgrel=6
-arch=('i686' 'x86_64')
-url="http://soft.proindependent.com/liborigin2/"
-license=('GPL3')
-makedepends=('doxygen' 'qt' 'boost')
-replaces=('liborigin')
-provides=('liborigin')
-source=(http://download.berlios.de/qtiplot/${pkgbase}-13092010.zip
-	liborigin.pro.archlinux
-	http://tree.phi-sci.com/tree.hh)
-md5sums=('e2b41c4d8a1e2d357dd2b5b331d31375'
-         '2b19f7a4bd120f6d689edc327468e48e'
-         '966ef25cb42d192a694a71eedf484c1c')
-
-build() {
-	cd "${srcdir}/${pkgbase}"
-
-	install -Dm644 "${srcdir}/liborigin.pro.archlinux" ./liborigin.pro
-        install -Dm644 "${srcdir}/tree.hh" ./tree.hh # get the header back like it was in previous releases
-	qmake liborigin.pro QMAKESPEC=linux-g++
-  	make QTDIR=/usr/ QMAKESPEC=linux-g++
-
-	 # create documentation
-        cd doc
-        doxygen
-}
-
-package_liborigin2() {
-        pkgdesc="A library for reading OriginLab OPJ project files"
-        depends=('boost-libs')
-
-        cd "${srcdir}/${pkgbase}"
-
-  	INSTALL_ROOT="${pkgdir}" make install
-
-        # install missing includes
-        install -Dm644 tree.hh "${pkgdir}/usr/include/liborigin2/tree.hh"
-        for i in *.h; do
-          install -Dm644 ${i} "${pkgdir}/usr/include/liborigin2/${i}"
-        done
-}
-package_liborigin2-docs() {
-        pkgdesc="Documentation for liborigin2: a library for reading OriginLab OPJ project files"
-
-        cd "${srcdir}/${pkgbase}/doc"
-	install -d "${pkgdir}/usr/share/doc/${pkgbase}"
-	cp -rf html/* "${pkgdir}/usr/share/doc/${pkgbase}"
-	chmod 755 "${pkgdir}/usr/share/doc/liborigin2/images"
-	chmod 644 "${pkgdir}/usr/share/doc/liborigin2/images/origin_import.png"
-}
diff --git a/staging/liborigin2/liborigin.pro.archlinux b/staging/liborigin2/liborigin.pro.archlinux
deleted file mode 100644
index d338a009c..000000000
--- a/staging/liborigin2/liborigin.pro.archlinux
+++ /dev/null
@@ -1,41 +0,0 @@
-TARGET  	 = origin2
-TEMPLATE     = lib
-CONFIG      += warn_on release thread
-#CONFIG      += staticlib 
-MOC_DIR      = ./tmp
-OBJECTS_DIR  = ./tmp
-
-DESTDIR      = ./
-
-#INCLUDEPATH += boost_1_33_0
-LIBS        += -lboost_date_time
-LIBS        += -lboost_thread
-
-HEADERS += endianfstream.hh
-HEADERS += logging.hpp
-HEADERS += OriginObj.h
-HEADERS += OriginFile.h
-HEADERS += OriginParser.h
-HEADERS += OriginDefaultParser.h
-HEADERS += Origin600Parser.h
-HEADERS += Origin610Parser.h
-HEADERS += Origin700Parser.h
-HEADERS += Origin750Parser.h
-HEADERS += Origin800Parser.h
-HEADERS += Origin810Parser.h
-
-SOURCES += OriginFile.cpp
-SOURCES += OriginParser.cpp
-SOURCES += OriginDefaultParser.cpp
-SOURCES += Origin600Parser.cpp
-SOURCES += Origin610Parser.cpp
-SOURCES += Origin700Parser.cpp
-SOURCES += Origin750Parser.cpp
-SOURCES += Origin800Parser.cpp
-SOURCES += Origin810Parser.cpp
-
-headers.files = \$\$HEADERS
-headers.path = /usr/include/liborigin2
-target.path = /usr/lib
-INSTALLS = target headers
-
diff --git a/staging/libpst/PKGBUILD b/staging/libpst/PKGBUILD
deleted file mode 100644
index 462bb5152..000000000
--- a/staging/libpst/PKGBUILD
+++ /dev/null
@@ -1,40 +0,0 @@
-# $Id: PKGBUILD 143595 2011-11-26 22:36:03Z ibiru $
-# Maintainer: Jan de Groot <jgc@archlinux.org>
-
-pkgbase=libpst
-pkgname=('libpst' 'libpst-docs')
-pkgver=0.6.53
-pkgrel=2
-arch=('i686' 'x86_64')
-url="http://www.five-ten-sg.com/libpst/"
-license=('GPL')
-makedepends=('python2' 'boost')
-source=(http://www.five-ten-sg.com/libpst/packages/${pkgbase}-${pkgver}.tar.gz)
-sha1sums=('b8e5972429091fd0e915fd3eb695b68adbe1f7cc')
-
-build() {
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-  ./configure --prefix=/usr --mandir=/usr/share/man \
-      --disable-static --enable-libpst-shared --disable-dii PYTHON_VERSION=2
-  make
-}
-
-package_libpst() {
-  pkgdesc="Outlook .pst file converter"
-  depends=('gcc-libs')
-  optdepends=('boost-libs: for libpst python interface')
-  options=('!libtool' '!docs')
-
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-  make DESTDIR="${pkgdir}" install
-}
-
-package_libpst-docs() {
-  pkgdesc="Documentation for Outlook .pst file converter"
-  options=('!libtool')
-
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-  make DESTDIR="${pkgdir}" install-htmlDATA
-  cd "${srcdir}/${pkgbase}-${pkgver}/html"
-  make DESTDIR="${pkgdir}" install-htmldevelDATA
-}
diff --git a/staging/libtorrent-rasterbar/PKGBUILD b/staging/libtorrent-rasterbar/PKGBUILD
deleted file mode 100644
index 3253c3fbc..000000000
--- a/staging/libtorrent-rasterbar/PKGBUILD
+++ /dev/null
@@ -1,28 +0,0 @@
-# $Id: PKGBUILD 143229 2011-11-23 16:48:02Z ibiru $
-# Maintainer : Ionut Biru <ibiru@archlinux.org>
-# Contributor: Hugo Doria <hugo@archlinux.org>
-
-pkgname=libtorrent-rasterbar
-pkgver=0.15.9
-pkgrel=1
-pkgdesc="A C++ library that aims to be a good alternative to all the other bittorrent implementations around"
-url="http://www.rasterbar.com/products/libtorrent/"
-arch=('i686' 'x86_64')
-license=('custom')
-depends=('boost-libs' 'python2')
-makedepends=('boost')
-options=('!libtool' '!emptydirs')
-source=(http://libtorrent.googlecode.com/files/$pkgname-$pkgver.tar.gz)
-sha1sums=('d86eb9d4452d07715a355d3a67312f162d6eff3a')
-
-build() {
-  cd "$srcdir/$pkgname-$pkgver"
-  ./configure --prefix=/usr --enable-python-binding
-  make
-}
-
-package() {
-  cd "$srcdir/$pkgname-$pkgver"
-  make DESTDIR="$pkgdir" install
-  install -D COPYING "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
-}
diff --git a/staging/lyx/PKGBUILD b/staging/lyx/PKGBUILD
deleted file mode 100644
index 07724fac7..000000000
--- a/staging/lyx/PKGBUILD
+++ /dev/null
@@ -1,47 +0,0 @@
-# $Id: PKGBUILD 143505 2011-11-25 08:45:52Z andrea $
-# Maintainer: Ronald van Haren <ronald.archlinux.org>
-# Contributor: Jason Chu <jason@archlinux.org>
-
-pkgname=lyx
-pkgver=2.0.1
-pkgrel=3
-pkgdesc="An advanced open-source document processor"
-arch=('i686' 'x86_64')
-url="http://www.lyx.org"
-depends=('qt' 'texlive-core' 'python2' 'perl' 'imagemagick' 'enchant' 'boost-libs' 'libmythes')
-makedepends=('boost')
-license=('GPL')
-source=(ftp://ftp.lip6.fr/pub/lyx/stable/2.0.x/$pkgname-$pkgver.tar.xz
-        lyx.desktop lyxrc.dist)
-backup=('etc/lyx/lyxrc.dist')
-install=lyx.install
-sha1sums=('225b4d853f38463e986a9b42a39cac432da56d8a'
-          'e2b8f6d6cdeec41e1d5795167f5557e4a6ea28ad'
-          '56416642cc3da2a13b87b84e6b87c1a239f3d09a')
-	
-build() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-  find . -type f -exec sed -i 's|#!.*python|#!/usr/bin/env python2|' {} +
-  sed -i 's|"python|"python2|' lib/configure.py src/support/os.cpp
-  export CXXFLAGS="$CXXFLAGS -fpermissive"
-  ./configure --prefix=/usr \
-    --with-frontend=qt4 --without-included-boost \
-    --without-included-mythes
-  make
-}
-
-package() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-
-  make DESTDIR="${pkgdir}" install
-
-  # install desktop entry
-  install -Dm644 "${srcdir}/lyx.desktop" \
-    "${pkgdir}/usr/share/applications/lyx.desktop"
-  install -Dm644 "lib/images/lyx.png" \
-    "${pkgdir}/usr/share/pixmaps/lyx.png"
-
-  # install default config file
-  install -Dm644 "${srcdir}/lyxrc.dist" "${pkgdir}/etc/lyx/lyxrc.dist"
-  ln -sf /etc/lyx/lyxrc.dist "${pkgdir}/usr/share/lyx/lyxrc.dist"
-}
diff --git a/staging/lyx/lyx.desktop b/staging/lyx/lyx.desktop
deleted file mode 100644
index 649b30c98..000000000
--- a/staging/lyx/lyx.desktop
+++ /dev/null
@@ -1,14 +0,0 @@
-[Desktop Entry]
-Version=1.0
-Type=Application
-Name=LyX Document Processor
-GenericName=Document Processor
-Comment=High level LaTeX frontend
-Exec=lyx %F
-TryExec=lyx
-Icon=lyx
-StartupNotify=false
-StartupWMClass=Lyx
-Terminal=false
-Categories=Office;WordProcessor;Qt;
-MimeType=text/x-lyx;application/x-lyx;
diff --git a/staging/lyx/lyx.install b/staging/lyx/lyx.install
deleted file mode 100644
index c15c17b3a..000000000
--- a/staging/lyx/lyx.install
+++ /dev/null
@@ -1,14 +0,0 @@
-post_install() {
-  update-desktop-database -q
-}
-
-post_upgrade() {
-  post_install
-}
-
-post_remove () {
-  post_install
-}
-
-
-
diff --git a/staging/lyx/lyxrc.dist b/staging/lyx/lyxrc.dist
deleted file mode 100644
index dd18694f9..000000000
--- a/staging/lyx/lyxrc.dist
+++ /dev/null
@@ -1,14 +0,0 @@
-### This file is part of
-### ========================================================
-###          LyX, The Document Processor
-###
-###          Copyright 1995 Matthias Ettrich
-###          Copyright 1995-2011 The LyX Team.
-###
-### ========================================================
-
-# The file lyxrc.dist gives initial global options for all LyX users.
-# Almost all settings here can be overridden through the preferences in LyX.
-
-\thesaurusdir_path "/usr/share/mythes"
-\hunspelldir_path "/usr/share/myspell"
diff --git a/staging/mkvtoolnix/PKGBUILD b/staging/mkvtoolnix/PKGBUILD
deleted file mode 100644
index 87a5a5633..000000000
--- a/staging/mkvtoolnix/PKGBUILD
+++ /dev/null
@@ -1,81 +0,0 @@
-# $Id: PKGBUILD 143843 2011-11-29 22:35:31Z giovanni $
-# Maintainer: Giovanni Scafora <giovanni@archlinux.org>
-
-pkgbase=mkvtoolnix
-pkgname=('mkvtoolnix-cli' 'mkvtoolnix-gtk')
-pkgver=5.0.1
-pkgrel=6
-arch=('i686' 'x86_64')
-license=('GPL')
-url="http://www.bunkus.org/videotools/mkvtoolnix/index.html"
-makedepends=('libmatroska' 'flac' 'libvorbis' 'file' 'wxgtk'\
-             'boost-libs' 'lzo2' 'xdg-utils' 'boost' 'ruby')
-source=("http://www.bunkus.org/videotools/${pkgbase}/sources/${pkgbase}-${pkgver}.tar.bz2")
-md5sums=('93fbbe946de6013eca699c0c2a93a4e9')
-
-build() {
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-
-  # Disable automagic curl dep used for online update checking
-  sed -i -e '/curl/d' configure.in
-  export CURL_CFLAGS="" CURL_LIBS=""
-
-  export CFLAGS="${CFLAGS} -DBOOST_FILESYSTEM_VERSION=2"
-  export CXXFLAGS="${CXXFLAGS} -DBOOST_FILESYSTEM_VERSION=2"
-
-  autoreconf
-
-  ./configure --prefix=/usr \
-              --with-boost-libdir=/usr/lib \
-              --disable-gui
-  rake
-
-  mv src/mkvinfo{,-cli}
-
-  ./configure --prefix=/usr \
-              --with-boost-libdir=/usr/lib
-  rake
-}
-
-package_mkvtoolnix-cli() {
-  pkgdesc="Set of tools to create, edit and inspect Matroska files - CLI version"
-  depends=('libmatroska' 'expat' 'flac' 'libvorbis' 'file' 'boost-libs' 'lzo2')
-  provides=('mkvtoolnix')
-  conflicts=('mkvtoolnix')
-  replaces=('mkvtoolnix')
-
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-
-  rake DESTDIR="${pkgdir}" install
-  rm -rf "${pkgdir}"/usr/bin/mkvinfo
-  install -Dm755 src/mkvinfo-cli "${pkgdir}"/usr/bin/mkvinfo
-
-  rm -rf "${pkgdir}"/usr/bin/mmg
-  rm -rf "${pkgdir}"/usr/share/man/ja/man1/mmg.1
-  rm -rf "${pkgdir}"/usr/share/man/man1/mmg.1
-  rm -rf "${pkgdir}"/usr/share/man/nl/man1/mmg.1
-  rm -rf "${pkgdir}"/usr/share/man/zh_CN/man1/mmg.1
-  rm -rf "${pkgdir}"/usr/share/applications
-  rm -rf "${pkgdir}"/usr/share/icons
-  rm -rf "${pkgdir}"/usr/share/mime
-}
-
-package_mkvtoolnix-gtk() {
-  pkgdesc="Set of tools to create, edit and inspect Matroska files - wxGTK GUI"
-  depends=("mkvtoolnix-cli=${pkgver}" 'wxgtk' 'xdg-utils')
-  install=mkvtoolnix.install
-
-  cd "${srcdir}/${pkgbase}-${pkgver}"
-
-  rake DESTDIR="${pkgdir}" install
-  rm -rf "${pkgdir}"/usr/bin/mkv*
-  install -Dm755 src/mkvinfo "${pkgdir}"/usr/bin/mkvinfo-gtk
-  sed -ri 's/^(Exec=mkvinfo)/\1-gtk/' "${pkgdir}"/usr/share/applications/mkvinfo.desktop
-
-  rm -rf "${pkgdir}"/usr/share/doc
-  rm -rf "${pkgdir}"/usr/share/locale
-  rm -rf "${pkgdir}"/usr/share/man/ja/man1/mkv*
-  rm -rf "${pkgdir}"/usr/share/man/man1/mkv*
-  rm -rf "${pkgdir}"/usr/share/man/nl/man1/mkv*
-  rm -rf "${pkgdir}"/usr/share/man/zh_CN/man1/mkv*
-}
diff --git a/staging/mkvtoolnix/mkvtoolnix.install b/staging/mkvtoolnix/mkvtoolnix.install
deleted file mode 100644
index 74d9eb2ef..000000000
--- a/staging/mkvtoolnix/mkvtoolnix.install
+++ /dev/null
@@ -1,14 +0,0 @@
-post_install() {
-   xdg-icon-resource forceupdate --theme hicolor &> /dev/null
-   if [ -f usr/bin/update-mime-database ]; then
-      update-mime-database usr/share/mime &> /dev/null
-   fi
-}
-
-post_upgrade() {
-   post_install
-}
-
-pre_remove() {
-   post_install
-}
diff --git a/staging/source-highlight/PKGBUILD b/staging/source-highlight/PKGBUILD
deleted file mode 100644
index d43c52790..000000000
--- a/staging/source-highlight/PKGBUILD
+++ /dev/null
@@ -1,32 +0,0 @@
-# $Id: PKGBUILD 143597 2011-11-26 22:48:36Z giovanni $
-# Maintainer: Giovanni Scafora <giovanni@archlinux.org>
-# Contributor: Douglas Soares de Andrade <douglas@archlinux.org>
-
-pkgname=source-highlight
-pkgver=3.1.5
-pkgrel=2
-pkgdesc="Convert source code to syntax highlighted document"
-arch=('i686' 'x86_64')
-url="http://www.gnu.org/software/src-highlite/"
-license=('GPL')
-depends=('gcc-libs' 'bash' 'boost-libs')
-makedepends=('ctags' 'boost')
-options=('!libtool')
-install=$pkgname.install
-source=("ftp://ftp.gnu.org/gnu/src-highlite/${pkgname}-${pkgver}.tar.gz")
-md5sums=('3117ee47c1c6b0668667e20d2aca3757')
-
-build() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-
-  ./configure --prefix=/usr \
-              --sysconfdir=/etc \
-	      --with-bash-completion=${pkgdir}/etc/bash_completion.d
-  make
-}
-
-package() {
-  cd "${srcdir}/${pkgname}-${pkgver}"
-
-  make prefix="${pkgdir}/usr" install
-}
diff --git a/staging/source-highlight/source-highlight.install b/staging/source-highlight/source-highlight.install
deleted file mode 100644
index 4fd1b3005..000000000
--- a/staging/source-highlight/source-highlight.install
+++ /dev/null
@@ -1,18 +0,0 @@
-info_dir=usr/share/info
-info_files=(source-highlight.info source-highlight-lib.info)
-
-post_install() {
-  for f in ${info_files[@]}; do
-    install-info ${info_dir}/$f.gz ${info_dir}/dir 2> /dev/null
-  done
-}
-
-post_upgrade() {
-	post_install
-}
-
-pre_remove() {
-  for f in ${info_files[@]}; do
-    install-info --delete ${info_dir}/$f.gz ${info_dir}/dir 2> /dev/null
-  done
-}
diff --git a/staging/wesnoth/PKGBUILD b/staging/wesnoth/PKGBUILD
deleted file mode 100644
index 2bc7e7e97..000000000
--- a/staging/wesnoth/PKGBUILD
+++ /dev/null
@@ -1,46 +0,0 @@
-# $Id: PKGBUILD 143610 2011-11-27 12:53:58Z ibiru $
-# Maintainer: Jan de Groot <jgc@archlinux.org>
-# Contributor: Tobias Powalowski <tpowa@archlinux.org>
-# Contributor: Jacobo Arvelo <unix4all@ya.com>
-# Contributor: Douglas Soares de Andrade <douglas@archlinux.org>
-
-pkgname=wesnoth
-pkgver=1.8.6
-pkgrel=3
-pkgdesc="A turn-based strategy game on a fantasy world"
-arch=('i686' 'x86_64')
-license=('GPL')
-url="http://www.wesnoth.org/"
-depends=('sdl_ttf' 'sdl_net' 'sdl_mixer' 'sdl_image' 'fribidi' 'boost-libs' 'pango' 'lua' "wesnoth-data=${pkgver}" 'dbus-core')
-makedepends=('boost')
-install=wesnoth.install
-options=(!emptydirs)
-source=(http://downloads.sourceforge.net/sourceforge/$pkgname/$pkgname-$pkgver.tar.bz2
-        wesnoth-libpng-1.4.0.patch
-        wesnoth-1.8.6-boost-foreach.patch
-        wesnoth.tmpfiles.conf)
-md5sums=('f1c3179869b01b61e253e74aeb241034'
-         'ca7412ffc4682ef55ddf82d56b0e2f08'
-         'dc414ab7e1334941548e9db6db9c2460'
-         'b8122f5054e3895c9c054e87460869dc')
-
-build() {
-  cd "$srcdir/$pkgname-$pkgver"
-  patch -Np1 -i "$srcdir/wesnoth-libpng-1.4.0.patch"
-  patch -Np1 -i "$srcdir/wesnoth-1.8.6-boost-foreach.patch"
-  ./autogen.sh
-  ./configure --prefix=/usr --localstatedir=/var --enable-tools \
-      --enable-editor --enable-server --with-fifodir=/run/wesnothd
-}
-
-package() {
-  cd "$srcdir/$pkgname-$pkgver"
-  make DESTDIR="$pkgdir" install-exec
-  install -dm755 "$pkgdir/usr/lib/tmpfiles.d/"
-  install -m644 "$srcdir/wesnoth.tmpfiles.conf" "$pkgdir/usr/lib/tmpfiles.d/wesnoth.conf"
-
-  sed -i "s|#!/usr/bin/env python|#!/usr/bin/env python2|" "$pkgdir/usr/bin/wesnoth_addon_manager"
-  sed -i "s|#!/usr/bin/env python|#!/usr/bin/env python2|" "$pkgdir/usr/bin/wmlindent"
-  sed -i "s|#!/usr/bin/env python|#!/usr/bin/env python2|" "$pkgdir/usr/bin/wmlscope"
-  sed -i "s|#!/usr/bin/env python|#!/usr/bin/env python2|" "$pkgdir/usr/bin/wmllint"
-}
diff --git a/staging/wesnoth/wesnoth-1.8.6-boost-foreach.patch b/staging/wesnoth/wesnoth-1.8.6-boost-foreach.patch
deleted file mode 100644
index 5aee3118c..000000000
--- a/staging/wesnoth/wesnoth-1.8.6-boost-foreach.patch
+++ /dev/null
@@ -1,70 +0,0 @@
---- wesnoth-1.8.6/src/gui/widgets/tree_view_node.cpp~	2011-07-21 23:05:56.594879049 +0200
-+++ wesnoth-1.8.6/src/gui/widgets/tree_view_node.cpp	2011-07-21 23:28:07.540358742 +0200
-@@ -238,6 +238,17 @@ void ttree_view_node::clear()
- 
- struct ttree_view_node_implementation
- {
-+	template<class W, class It>
-+	static W* find_at_aux(It begin, It end,
-+			      const tpoint& coordinate, const bool must_be_active) {
-+		for (It it = begin; it != end; ++it) {
-+			if(W* widget = it->find_at(coordinate, must_be_active)) {
-+				return widget;
-+			}
-+		}
-+		return NULL;
-+	}
-+
- 	template<class W>
- 	static W* find_at(
- 			  typename tconst_duplicator<W, ttree_view_node>::type&
-@@ -255,13 +266,9 @@ struct ttree_view_node_implementation
- 		}
- 
- 		typedef typename tconst_duplicator<W, ttree_view_node>::type thack;
--		foreach(thack& node, tree_view_node.children_) {
--			if(W* widget = node.find_at(coordinate, must_be_active)) {
--				return widget;
--			}
--		}
--
--		return NULL;
-+		return find_at_aux<W>(tree_view_node.children_.begin(),
-+				      tree_view_node.children_.end(),
-+				      coordinate, must_be_active);
- 	}
- };
- 
-@@ -313,7 +320,9 @@ tpoint ttree_view_node::get_current_size
- 		return size;
- 	}
- 
--	foreach(const ttree_view_node& node, children_) {
-+	for (boost::ptr_vector<ttree_view_node>::const_iterator it
-+	       = children_.begin (); it != children_.end (); ++it) {
-+		const ttree_view_node& node = *it;
- 
- 		if(node.grid_.get_visible() == twidget::INVISIBLE) {
- 			continue;
-@@ -344,7 +353,9 @@ tpoint ttree_view_node::get_unfolded_siz
- 		size.x += (get_indention_level() - 1) * tree_view().indention_step_size_;
- 	}
- 
--	foreach(const ttree_view_node& node, children_) {
-+	for (boost::ptr_vector<ttree_view_node>::const_iterator it
-+	       = children_.begin (); it != children_.end (); ++it) {
-+		const ttree_view_node& node = *it;
- 
- 		if(node.grid_.get_visible() == twidget::INVISIBLE) {
- 			continue;
-@@ -378,7 +389,9 @@ tpoint ttree_view_node::calculate_best_s
- 
- 	DBG_GUI_L << LOG_HEADER << " own grid best size " << best_size << ".\n";
- 
--	foreach(const ttree_view_node& node, children_) {
-+	for (boost::ptr_vector<ttree_view_node>::const_iterator it
-+	       = children_.begin (); it != children_.end (); ++it) {
-+		const ttree_view_node& node = *it;
- 
- 		if(node.grid_.get_visible() == twidget::INVISIBLE) {
- 			continue;
diff --git a/staging/wesnoth/wesnoth-libpng-1.4.0.patch b/staging/wesnoth/wesnoth-libpng-1.4.0.patch
deleted file mode 100644
index be8adfcaa..000000000
--- a/staging/wesnoth/wesnoth-libpng-1.4.0.patch
+++ /dev/null
@@ -1,14 +0,0 @@
-diff -Nur wesnoth-1.8.orig/src/tools/exploder_utils.cpp wesnoth-1.8/src/tools/exploder_utils.cpp
---- wesnoth-1.8.orig/src/tools/exploder_utils.cpp	2010-01-01 15:16:49.000000000 +0200
-+++ wesnoth-1.8/src/tools/exploder_utils.cpp	2010-04-08 17:38:03.066201123 +0300
-@@ -174,8 +174,8 @@
- 	//TODO: review whether providing NULL error handlers is something
- 	//sensible
- 	png_struct* png_ptr = png_create_write_struct
--		(PNG_LIBPNG_VER_STRING, reinterpret_cast<png_voidp>(png_voidp_NULL),
--		 png_error_ptr_NULL, png_error_ptr_NULL);
-+		(PNG_LIBPNG_VER_STRING, reinterpret_cast<png_voidp>(NULL),
-+		 NULL, NULL);
- 	if(!png_ptr)
- 		throw exploder_failure("Unable to initialize the png write structure");
- 
diff --git a/staging/wesnoth/wesnoth.install b/staging/wesnoth/wesnoth.install
deleted file mode 100644
index 4f1e419ae..000000000
--- a/staging/wesnoth/wesnoth.install
+++ /dev/null
@@ -1,9 +0,0 @@
-# arg 1:  the new package version
-post_install() {
-cat << EOF
-Note:
-==> If you experience sound problems try setting your SDL_AUDIODRIVER environment variable to "dma"
-==> eg. export SDL_AUDIODRIVER="dma" ; wesnoth
-==> If "dma" doesn't work,other options are: dsp,alsa,artsc,esd,nas try to find the right output.
-EOF
-}
diff --git a/staging/wesnoth/wesnoth.tmpfiles.conf b/staging/wesnoth/wesnoth.tmpfiles.conf
deleted file mode 100644
index 3ec0f6013..000000000
--- a/staging/wesnoth/wesnoth.tmpfiles.conf
+++ /dev/null
@@ -1 +0,0 @@
-D /run/wesnothd 0700 root root -
author	Parabola <dev@list.parabolagnulinux.org>	2011-12-07 15:02:31 +0000
committer	Parabola <dev@list.parabolagnulinux.org>	2011-12-07 15:02:31 +0000
commit	8736f458a17a03cf79a763a0c8122f93162fed71 (patch)
tree	fba97f22de8410ee5df8985e6c98756093578100 /staging
parent	d1d87d2ac643e3dabc251f3cec7d3b00e29b282c (diff)